PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019175769.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

VOZ

Protein Properties

Length: 479aa MW: 53533.3 Da PI: 5.1462

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019175769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	424.1	2.2e-130	200	419	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewl...qdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 pppsaflgpkcalwdc+rpa gs+w+ qdycs +ha+la neg pg tp++rp gi+lkd+llf+alsak+qgk+vgipecegaatakspwna XP_019175769.1 200 PPPSAFLGPKCALWDCPRPAMGSDWCqksQDYCSDYHASLAPNEGFPGHTPIVRPMGIGLKDNLLFQALSAKAQGKDVGIPECEGAATAKSPWNA 294 89*********************944459************************************************************ PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlel 187 +elfdl+++egetirewlffd prrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp++++ewhlyeyein++da+alyrlel XP_019175769.1 295 PELFDLKVVEGETIREWLFFDMPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPMKNLEWHLYEYEINKYDACALYRLEL 389 ******************************************************************************************* PP VOZ 188 klvdekksakgkvskdsladlqkklgrlta 217 klvd+kks+kgkvs++s++dlqk+++rlta XP_019175769.1 390 KLVDGKKSPKGKVSTESVVDLQKQMVRLTA 419 **************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MGKSSRSIAG RSATYQIFKD RAKNRVDDLQ GMFTDLQSLR KESRTIEVAV LEEQLNQMLR 60 EWKAELNEPS PASSLQGGSL GFNTSDLCRL VQLGEEDDDA TSALAAPKHE PDAQRVGATG 120 YQEDLNVTQV LQAQNFQLVD QCKSNHIGAN NVGIDNMGIP AQLDYQSYEF QQDYGQQYFP 180 GFDGVNLCLE DALPAVHISP PPSAFLGPKC ALWDCPRPAM GSDWCQKSQD YCSDYHASLA 240 PNEGFPGHTP IVRPMGIGLK DNLLFQALSA KAQGKDVGIP ECEGAATAKS PWNAPELFDL 300 KVVEGETIRE WLFFDMPRRA FESGNRKQRS LPDYNGRGWH ESRKQVMNEF GGLKRSYYMD 360 PQPMKNLEWH LYEYEINKYD ACALYRLELK LVDGKKSPKG KVSTESVVDL QKQMVRLTAE 420 FPPENKRPVK GRAKSNLKDS TGCIPPIPNQ MIPVSEGFGY PPGATYDYLI DNLSGYYLT

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MGKSSRSIAG RSATYQIFKD RAKNRVDDLQ GMFTDLQSLR KESRTIEVAV LEEQLNQMLR  60
EWKAELNEPS PASSLQGGSL GFNTSDLCRL VQLGEEDDDA TSALAAPKHE PDAQRVGATG  120
YQEDLNVTQV LQAQNFQLVD QCKSNHIGAN NVGIDNMGIP AQLDYQSYEF QQDYGQQYFP  180
GFDGVNLCLE DALPAVHISP PPSAFLGPKC ALWDCPRPAM GSDWCQKSQD YCSDYHASLA  240
PNEGFPGHTP IVRPMGIGLK DNLLFQALSA KAQGKDVGIP ECEGAATAKS PWNAPELFDL  300
KVVEGETIRE WLFFDMPRRA FESGNRKQRS LPDYNGRGWH ESRKQVMNEF GGLKRSYYMD  360
PQPMKNLEWH LYEYEINKYD ACALYRLELK LVDGKKSPKG KVSTESVVDL QKQMVRLTAE  420
FPPENKRPVK GRAKSNLKDS TGCIPPIPNQ MIPVSEGFGY PPGATYDYLI DNLSGYYLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein