PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176351.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 215aa    MW: 23953.2 Da    PI: 10.1054
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.24.6e-16114192990
                     HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     ++++   +++pk f+ee g+   +++ +tl d +g++We+k+  +k++g+ ++ ++ W +F  an+L  g +++F+l+g++++
  XP_019176351.1 114 SASTDEEMIIPKGFVEETGIA--GKRNITLLDARGEKWEIKI--SKQDGEfVMCGGRWADFRIANRLSKGYVCTFELVGSHGG 192
                     45566679*********9866..5668***************..9999885666777********************998666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MSNFNMQNEN PSFFKILSAS DFASVLRLPP LFGKIFGEKL SSTPSLAMAG SWKSWTVKLK  60
KSSNRYLFAD GENSSNLGQT MSVKKESETE DDKSQISIGP SKTTTNPSFV TILSASTDEE  120
MIIPKGFVEE TGIAGKRNIT LLDARGEKWE IKISKQDGEF VMCGGRWADF RIANRLSKGY  180
VCTFELVGSH GGHHQLQFHL EKRARGRPLG RHSRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-09B3 family protein