PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176428.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 159aa    MW: 17279.6 Da    PI: 9.1241
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176428.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2561e-172271255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ykG+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  XP_019176428.1 22 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPLAAARAYDTAVYYLRG 71
                    59*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MEGQGGGDDG GCCSGKRKKE RPYKGIRMRK WGKWVAEIRE PNKRSRIWLG SYSTPLAAAR  60
AYDTAVYYLR GPSARLNFPE LLAGDAAGGL NDLSADSIRK KAIEVGASVD ATQTSLRGGA  120
VQEQPPPPPP PPPLTACRLQ AKLDLNEKPE PEDPNLDYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.13e-51ERF family protein