PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176450.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 206aa    MW: 23197.9 Da    PI: 9.5655
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000193153123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ Fs++  L  H++ H
  XP_019176450.1 31 FSCKFCKREFSSSQALGGHQNAH 53
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MEAIISNSNS SNEGEPNERR DDDSLPANKN FSCKFCKREF SSSQALGGHQ NAHKSERASA  60
KRRQGLIDTF VNSRYHPYYP RPYSTFSSQM PIYNPLINRS LGMPNFPRLP FYHQPLLLGQ  120
NYSRLDMIRP ASNLMINNGP FATTSVANSS KLDINMGQFT STIKVDGNRT FAGDSKTEGQ  180
NNPLLRDDKK GKDEEDAWGI NLTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.12e-13C2H2 family protein