PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176549.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family BBR-BPC
Protein Properties Length: 282aa    MW: 31021.3 Da    PI: 9.8619
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind311.33.4e-9512821301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki...rernlalsekkaavaerd..........maflqrdkalaernkalverdnkll 82 
                     mdddg + rn+gyyep+   k  lglqlm s+ +rd+++     +n++++++++ +++r+          +++  rd ++++        ++k+l
  XP_019176549.1   1 MDDDGLNMRNWGYYEPS--HKGPLGLQLMPSMVDRDTRTffsGRENTSMMATNGLFHSREsvvsqaslthIDY-IRDGWINH--------RDKFL 84 
                     9*****99*******99..7899***************9999555666************8887777776666.67777777........78999 PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++ +        +p g +v+ + + ++s+ q     l+ ++++   e   e+  +e   +++ + + ++k++ ++ + ++kakk+kk ++++kk+
  XP_019176549.1  85 HMFP-------GNPYGGGVMADPSGTQSSMQ----MLQTDSTK---E---EVGTVE--DPSVGKDSCPSKKRPGAAASSPKAKKPKKGPSAPKKN 160
                     9999.......45777777777666664433....23333333...1...222322..35556666666678888899999999***99999999 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                      +++   +r+k  kksid+v+ g+++D+s++P+PvC+CtG+++qCY+WG+GGWqSaCCtttiS+yPLP++ krrgaRiagrKmSqgafkk+LekL
  XP_019176549.1 161 DNPPA--QRAKPAKKSIDVVISGIDMDISSIPTPVCTCTGTPQQCYRWGCGGWQSACCTTTISMYPLPMNNKRRGARIAGRKMSQGAFKKVLEKL 253
                     99999..79************************************************************************************** PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     a+eGy++s p+DL+++WAkHGtnkfvtir
  XP_019176549.1 254 ASEGYNFSDPIDLRTYWAKHGTNKFVTIR 282
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDDDGLNMRN WGYYEPSHKG PLGLQLMPSM VDRDTRTFFS GRENTSMMAT NGLFHSRESV  60
VSQASLTHID YIRDGWINHR DKFLHMFPGN PYGGGVMADP SGTQSSMQML QTDSTKEEVG  120
TVEDPSVGKD SCPSKKRPGA AASSPKAKKP KKGPSAPKKN DNPPAQRAKP AKKSIDVVIS  180
GIDMDISSIP TPVCTCTGTP QQCYRWGCGG WQSACCTTTI SMYPLPMNNK RRGARIAGRK  240
MSQGAFKKVL EKLASEGYNF SDPIDLRTYW AKHGTNKFVT IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.12e-92BBR-BPC family protein