PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176586.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 216aa    MW: 24139.6 Da    PI: 8.1307
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.88.3e-13271091499
                     T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
              B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                     ++  +p + +e +  +k  s   +l+ +s+r W+vkl  +    r ++ +GW +F ++n L+  Df+ F + g  +++++ v++f+k
  XP_019176586.1  27 NLKQIPVELLEFM--PKGLSGSAVLRGLSSRHWTVKL--SLEAYRLFINEGWDRFFEENALCKDDFLAFGHCGGgETEKFDVRIFDK 109
                     5556777777555..34566789**************..55555699*************************88899999****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MKWCIRLWKP GCLIYIDWDN SRVTILNLKQ IPVELLEFMP KGLSGSAVLR GLSSRHWTVK  60
LSLEAYRLFI NEGWDRFFEE NALCKDDFLA FGHCGGGETE KFDVRIFDKH GRERLDVSDA  120
VGLSATNQEI KKEDTSVAFG GKEKGCKYSE NNTLSGLQGE NLGDGLPPGT SVHTRSVRNR  180
DGPAKIGENL SIGLSLKLHA RGRGMDQQKV VLQQCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.11e-08B3 family protein