PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176869.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 215aa    MW: 24720.7 Da    PI: 4.9797
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.9e-1755104255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++kGVr ++ rgrWv+eIr+p     r kr +lg++++ +eAa ++++a  +l+g
  XP_019176869.1  55 KFKGVRKRP-RGRWVVEIRVPA----RgKRLWLGTYDSRKEAATLYDNASVRLKG 104
                     89*******.8*********82....36*********************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MLWNRVLRIV VTEGNATDSS DDEGERAVGM WRRVKRHMWG IKFVPTPPFD ACSRKFKGVR  60
KRPRGRWVVE IRVPARGKRL WLGTYDSRKE AATLYDNASV RLKGPNAVTN FPKKTVTETA  120
VDTSLTSRNA ALSPASVLRY DDFTPFDSPV QSDFIPNEAA AVNEFFALDN LDFENFDFDF  180
DFDFDFDFDF FGLPSFPLFA THCVHEFDEF DADIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.15e-25ERF family protein