PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176870.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 100aa    MW: 11747.6 Da    PI: 9.822
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.31.9e-135598249
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaa 49
                    +++GV  ++ rgrW+ eIrdp+    r kr +lg++++ eeAa+ +++a
  XP_019176870.1 55 KFRGVLKRP-RGRWAMEIRDPT----RgKRLWLGNYDSLEEAAAVYDNA 98
                    89****9**.8*********84....35*******************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MLWNRVLLIV VTDCDATDSS DDEGERAVRM WRRVKWHMWG IKFVSTLPFN ACCRKFRGVL  60
KRPRGRWAME IRDPTRGKRL WLGNYDSLEE AAAVYDNASV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.13e-19ERF family protein