PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176871.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 207aa    MW: 23883.9 Da    PI: 4.5395
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176871.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.34.5e-0955104255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr  + rgrW+ eI+dp+    r kr +l +++++ee    +++a  +l+g
  XP_019176871.1  55 KFRGVRKWP-RGRWALEICDPT----RgKRLWLDTYDSPEETVVVYDNASVRLKG 104
                     89****999.8*********83....35*************99999998877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MLRNRVLWIV VTDSAATDYS DDEGERAVGM WRRVKRHMWG IKFVPMPPFD ACSQKFRGVR  60
KWPRGRWALE ICDPTRGKRL WLDTYDSPEE TVVVYDNASV RLKGLDAVTN FLKNTVTETA  120
VDTSLTSSNT ALSPASVLCY DDFTPFDRPV QSTFIPNEAA AVNEFKALDN LDFENFDFDF  180
YFFGLTIFPL FPTHCVHEFD EFDAENY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.17e-22ERF family protein