PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176873.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 207aa    MW: 23843.8 Da    PI: 4.3467
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176873.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.82.6e-0855104255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++ GVr  + rgrW+ eI+dp+    r kr +l +++++ee    +++a  +l+g
  XP_019176873.1  55 KFIGVRKWP-RGRWALEICDPT----RgKRLWLDTYDSPEETVVVYDNASVRLKG 104
                     789***999.8*********83....35*************99999999888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MLRNRVLWIV VTDSAATDYS DDEGERAVGM WMRVKRHMWG IKFVPMPPFD ACSQKFIGVR  60
KWPRGRWALE ICDPTRGKRL WLDTYDSPEE TVVVYDNASV RLKGPDAVTN FLKNTVTETA  120
VDTSLTSSNT ALSPASVLCY DDFTPFDRPV QSDFIPNEAT AVNEFKALDN LDFENFDFDF  180
YFFGLTIFPL FPTHCVHEFD EFDAENY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-21ERF family protein