PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176874.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 168aa    MW: 19194.3 Da    PI: 4.262
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176874.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.55e-161053249
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaa 49
                    +++GVr ++ rgrW++eIrdp+    r kr +lg++++ eeAa  +++a
  XP_019176874.1 10 KFRGVRKRP-RGRWAVEIRDPT----RgKRLWLGTYDSQEEAAVVYDNA 53
                    89*******.8*********84....35******************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MPSFDACSRK FRGVRKRPRG RWAVEIRDPT RGKRLWLGTY DSQEEAAVVY DNASVRPKGP  60
DAVTNFPTKM VTETAVNTSL TPSNATLSPA SVPRYDDFTP FDSPVQSDFI PNEAAVVNEF  120
KALDNLDFEN FDFDFDFDFD FDFFGLTIFP LFATHCVHEF DEFDAEIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.12e-25ERF family protein