PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177185.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 288aa    MW: 30880.7 Da    PI: 5.0332
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177185.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof109.81.3e-343087461
          zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    + +kcprCds ntkfCyynnys sqPry+Ck+CrryWtkGG lr vPvGg++r+ kk 
  XP_019177185.1 30 APQKCPRCDSPNTKFCYYNNYSQSQPRYLCKTCRRYWTKGGVLRTVPVGGSCRRTKKI 87
                    5689**************************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MAAGNKGDEQ MSGDGKKTPA VTRPQQPSPA PQKCPRCDSP NTKFCYYNNY SQSQPRYLCK  60
TCRRYWTKGG VLRTVPVGGS CRRTKKIMKS SLAAITDLGG LGYLNGGVSP PLDFNLLGGI  120
KVPSYNTSAA ALISQLSGAL LAMPPTNPCF SLDPLPCSSI SSSYLLDTGN SGASQELGSL  180
APLIQPVGTV NQDLQWNLQH KKMLGVPADL ENQIQNPQPI LLFQNLEIPT PPSESSFGSS  240
SRIAEATEWL FDDDPTTFGN GSGNAGDDDW DDLIQAWATN FNEFSALP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.18e-43Dof family protein