PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177190.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 221aa    MW: 24496.2 Da    PI: 6.5145
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177190.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.23e-1670120255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y GVr +  +g+++AeIrd + ng   r++lg+f++ae+Aa a+++a+  ++g
  XP_019177190.1  70 QYVGVRKRA-WGKYAAEIRDSTRNG--MRVWLGTFDSAEDAALAYDQAAFLIRG 120
                     79****887.**********44465..**********************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MEDLHWDNIN AIPFDCDQWD NDALCLSAEE DEIIISSFMN KGGVKSSQKP EASVAKEVKA  60
AAAAELEEKQ YVGVRKRAWG KYAAEIRDST RNGMRVWLGT FDSAEDAALA YDQAAFLIRG  120
PSTYLNFPSE RVRKSLQEIK CSCKSGSSPV DALKENNKKR SSSCSNSTRF DGTRTTKRSV  180
KKNSSSSSHV VVFEDLGPEL LDELLSQSSD STTCNHHSSR R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-27ERF family protein