PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177314.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 329aa    MW: 36456.7 Da    PI: 6.1591
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.36.1e-21161211256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  XP_019177314.1 161 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 211
                     59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MAAAIDIYNS SSPVYIDPFR EELMKALEPF MKGASSPPPS SSSFSSSSPP SSSSSYYPFE  60
SSFSTDPYLY HEFTPIPAAA GMFSGFESMG FEQRGPIGLN QLTPSQILQI QAQIHLQNQE  120
QSLASSSVVL PRQQPSSCLS YLGPRPVPMK QTGAPNKPTK LYRGVRQRHW GKWVAEIRLP  180
RNRTRLWLGT FDTAEEAALA YDKAAYKLRG EYARLNFPNL RHQLSQDFAD FKPLPSSVDA  240
KLQAICQNLA ESQKQGSSKA SQTKRTKNKP ESNNIKAESG SSSDSPALSE ESSPESDITF  300
LDFPEPSFEE SENFSLQKFP SVEIDWSAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.12e-52ERF family protein