PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177406.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 203aa    MW: 22541.7 Da    PI: 5.1377
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177406.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding513.3e-16241546
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     T+ E+ l+++++ +lG++ W++Iar+++ gRt++++k++w++
   XP_019177406.1  2 TPNEERLILELHSKLGNR-WSKIARKLP-GRTDNEIKNYWRT 41
                     999***************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MTPNEERLIL ELHSKLGNRW SKIARKLPGR TDNEIKNYWR TQMRKEAHDK KKKKQQQKGG  60
GGGASSSPSS LSNSSSSSSG SPGEESTPAV VGANERAFYD TGGFVEAPPP PPRADNGEKM  120
GGGVKVYSMD EIWKAIESPE IQESHGGGER SMIGSAIWDD YSVWTMDYDY QEDERNLVAP  180
VSDQFYSWFD NQLDFAHNTF LTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.21e-25MYB_related family protein