PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019177478.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

DBB

Protein Properties

Length: 169aa MW: 18547.1 Da PI: 7.0908

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019177478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.2	1.4e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC+ C ++ H XP_019177478.1 4 LCDVCESAAAILFCAADEAALCRACDDKVH 33 7*************************9998 PP
2	zf-B_box	28.5	3.1e-09	55	93	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38 ++C+ +e+ ++ ++Ce +++ lC +C + H g H+ XP_019177478.1 55 PRCDICENAPAFFYCEVDGSSLCLQCDMIVHVGgkrtHS 93 79**************************99966566675 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MRTLCDVCES AAAILFCAAD EAALCRACDD KVHMCNKLAS RHVRVGLANP PIVVPRCDIC 60 ENAPAFFYCE VDGSSLCLQC DMIVHVGGKR THSRYLLMRQ RVEFPGDKAG QTEEPPRLTS 120 DPGQQNHAAA AAVPVSDNTK DGHAKRENKM IDLNMKPTRI HGQNSNNQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	3e-71	DBB family protein