PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177544.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 175aa    MW: 18783 Da    PI: 8.1988
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-183282255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y GVr ++ +g+++AeIrd + ng  +r++lg+f +aeeAa a+++a++ ++g
  XP_019177544.1 32 HYVGVRKRP-WGKYAAEIRDTTRNG--ARVWLGTFSSAEEAALAYDQAALLMRG 82
                    79*******.**********54465..***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MEADEIKQSF KPSSSDNDDD ISREKCSGKE KHYVGVRKRP WGKYAAEIRD TTRNGARVWL  60
GTFSSAEEAA LAYDQAALLM RGPSSCLNFP VERVRASIQE LKLYCGGGEE GGGGSSSPAE  120
ALKEKHKKRC GKGKSGKGVV KQSCAGGNNV VFVFEDLGSD LLDQLLSQTS ASSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.17e-25ERF family protein