PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177590.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 223aa    MW: 26252.5 Da    PI: 4.2962
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding316e-10103145146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r rW++e+ e l++a++q+G++ ++ I ++++ gRt+ q+++++ k
   XP_019177590.1 103 RVRWSKEDTEVLYEAIRQFGSD-FSMI-QHFP-GRTRAQVRLKYKK 145
                      78********************.9998.5677.7**********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MVDKALLDTP EDEIDFQRVR INDLILLAEH KERLAKKEAA LQNPQPQVNQ SNFDNSSELN  60
NEEERFTFDE DENGEAFEEQ TTNEVEDSTI YFNYQTYMEK TPRVRWSKED TEVLYEAIRQ  120
FGSDFSMIQH FPGRTRAQVR LKYKKEEQRH PSRVHDALTN RSKDHSRFEQ VIAQLKQIAA  180
EEIQNDDGID ESIDLTGEEV EGQKEESKSE HNEEAEVQYK SEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.12e-37MYB_related family protein