PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178067.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 349aa    MW: 38480.6 Da    PI: 5.5809
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.41.1e-26116176259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDgynWrKYGqK++ g++fp++YYrC++    gC +kk++++s++dp+v+++ Y+g+H+++
  XP_019178067.1 116 DDGYNWRKYGQKKIMGAQFPKGYYRCSHLysrGCLAKKEIQKSDDDPTVFNVRYRGNHTCN 176
                     8**************************98888***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MEKEVGVDGE FNLNDLIMSE LLQGRDAAKR LHMCLQNNAA LLSSSSQDWS CEVLANKVQC  60
SLDNALCMLN HAAGRNESSD SDREVRDATS GRRRKAAVWT DHVQVSHGEG LEEAHDDGYN  120
WRKYGQKKIM GAQFPKGYYR CSHLYSRGCL AKKEIQKSDD DPTVFNVRYR GNHTCNNPSP  180
RLQSPPPPRT LDNEEPPSTL QTQQEDNLLN LRRNLKIKTD NIEASSHGRD ENPFPSSSYD  240
FASSSGGIKV GEIHCGFPQP PTTTVVGNSF VSPATSGSSC FTMSPTTTTT QNLGSQFVPT  300
TSDLEMIMEI PTATSGTNSP VVGMGFPFDA TMAFDFTFTF HNNNPGFFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-30WRKY family protein