PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178104.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 254aa    MW: 27632.9 Da    PI: 7.9762
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178104.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59e-2089138255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a++ a+ +++g
  XP_019178104.1  89 VYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDVAATRIRG 138
                     69*******.**********94....35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MCGGAIISDY DPISERRRRK ISTHDLWAEL DPISELWSFN SSSAINGLKQ SSPSTLPVVT  60
NRLNQVLLCK DGGAENAEKS EKKRARKNVY RGIRQRPWGK WAAEIRDPQK GVRVWLGTFN  120
TAEEAARAYD VAATRIRGKK AKLNFPSPAP SPATKPSCGS VAVRAHSPQE SSDSSSATAA  180
SLNPSPLVGA ADGHHNQGGS EFKVQISDLE SFLGLEPEPT QLGAEFDSFD PFLVGPVEEC  240
FPATQQHQVF YTVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-39ERF family protein