PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178105.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 252aa    MW: 27406.6 Da    PI: 7.9762
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.9e-2087136255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a++ a+ +++g
  XP_019178105.1  87 VYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDVAATRIRG 136
                     69*******.**********94....35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MCGGAIISDY DPISERRRRK ISTHDLWAEL DPISELWSFN SSSAINGLKQ SSPSTLPVVT  60
NRLNQVCKDG GAENAEKSEK KRARKNVYRG IRQRPWGKWA AEIRDPQKGV RVWLGTFNTA  120
EEAARAYDVA ATRIRGKKAK LNFPSPAPSP ATKPSCGSVA VRAHSPQESS DSSSATAASL  180
NPSPLVGAAD GHHNQGGSEF KVQISDLESF LGLEPEPTQL GAEFDSFDPF LVGPVEECFP  240
ATQQHQVFYT VP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-40ERF family protein