PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178106.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 247aa    MW: 26904 Da    PI: 8.0841
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.6e-2082131255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a++ a+ +++g
  XP_019178106.1  82 VYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDVAATRIRG 131
                     69*******.**********94....35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MCGGAIISDY DPISERRRRK ISTHDLWAEL DPISELWSFN SSSAINGLKQ SSPSTLPVVT  60
NRLNQGAENA EKSEKKRARK NVYRGIRQRP WGKWAAEIRD PQKGVRVWLG TFNTAEEAAR  120
AYDVAATRIR GKKAKLNFPS PAPSPATKPS CGSVAVRAHS PQESSDSSSA TAASLNPSPL  180
VGAADGHHNQ GGSEFKVQIS DLESFLGLEP EPTQLGAEFD SFDPFLVGPV EECFPATQQH  240
QVFYTVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-40ERF family protein