PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178380.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 209aa    MW: 23387.2 Da    PI: 4.936
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178380.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.1e-1874124255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr ++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g
  XP_019178380.1  74 SYRGVRKRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEAAALAYDQAAFAMRG 124
                     69*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MDDSWLVQCQ NSNAIESLWE DSLPFNVNDS QEMVLLEVLA AETTSGKESS ETTNASEEEV  60
SSEEGRKKKA AEKSYRGVRK RPWGKFAAEI RDSTRNGVRV WLGTFDSAEA AALAYDQAAF  120
AMRGSLAVMN FPEEVVRESL REMMKCGFKE GCSPVVELKR RHSMIRKRSS ACRRSRAKEN  180
NVVVVLEDLG AEFLEQLLTS SESATTSTW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-44ERF family protein