PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178386.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 257aa    MW: 29177 Da    PI: 7.5245
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.72.4e-49101401129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     lppGfrF P+deelv++yL kkv +++ ++++  + e+d++++ePw+Lp+ +k ++kewyfFs rd+kyatg r+nrat+ gyWk tgkd+++l+
  XP_019178386.1  10 LPPGFRFYPSDEELVCHYLYKKVIANNRRVSKYtLVEIDLHTCEPWQLPEVAKLNSKEWYFFSFRDRKYATGYRSNRATTCGYWKGTGKDRRILD 104
                     79********************999998887767***************88888999************************************** PP

             NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                       +g++ g++ktLvfy+ rap+g+ktdW+mhe+rle
  XP_019178386.1 105 PaTGTVLGMRKTLVFYHHRAPHGVKTDWIMHEFRLE 140
                     978889***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MGLRDIEATL PPGFRFYPSD EELVCHYLYK KVIANNRRVS KYTLVEIDLH TCEPWQLPEV  60
AKLNSKEWYF FSFRDRKYAT GYRSNRATTC GYWKGTGKDR RILDPATGTV LGMRKTLVFY  120
HHRAPHGVKT DWIMHEFRLE NPHIPPKEEW VLCRVFHKSK ATGICHESIV DATAGTSASS  180
PNAVNNAFLP VGYSPMSGVT AGNVGMAAQS KREEDDEYGF FYNVNCEEAN FQAGGGVPLW  240
LEDFCRFDNG GNGLLFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.13e-83NAC family protein