PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178405.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 176aa    MW: 20763.9 Da    PI: 10.1422
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR188.31.1e-271199189
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89
                    +fY++YA+++GF +r+++ ++s+ +++i +r++ C+k+g+  + k++   +r++r++tr gCka++ vk +k+gkw+vt++++eH+H+l
  XP_019178405.1 11 EFYDNYARRAGFVMRIDQCRRSEVDKRILSRRLSCNKQGYYVKMKDQFGPARKPRTSTREGCKAMMLVKVDKSGKWVVTRFVKEHTHPL 99
                    6*****************************************999999***************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MEFESEDAAK EFYDNYARRA GFVMRIDQCR RSEVDKRILS RRLSCNKQGY YVKMKDQFGP  60
ARKPRTSTRE GCKAMMLVKV DKSGKWVVTR FVKEHTHPLI VSGRPSRNAM DHKDRRIHEL  120
TMELNRQDRL CELYRDQLNT LLKYIEEQIE VVSGKVQVVV SNVNQVEKEA RKPPNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.13e-66FAR1 family protein