PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178944.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YA
Protein Properties Length: 195aa    MW: 21650.9 Da    PI: 8.1118
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.91.3e-31100156158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy++Il+RRq+Rak+e+e+kl +++rkpylheSRh hAlrR+Rg+gG+F
  XP_019178944.1 100 EEPVFVNAKQYHGILRRRQSRAKAESENKL-HRNRKPYLHESRHLHALRRARGCGGQF 156
                     69****************************.*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MTSSDNSETG QHENQSSPPS QVMPHPGTVA PMPSGILPQL GNGNAMAQTG YPYPDPYYRS  60
IFAPYDTQPY PQHFPAQSMV NLQLMGVQQA GVPLPSDAVE EPVFVNAKQY HGILRRRQSR  120
AKAESENKLH RNRKPYLHES RHLHALRRAR GCGGQFLTSK KSDENQQKKE ELCDKSQPTG  180
NHNSENCDVA SENGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.22e-61NF-YA family protein