PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019179009.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 151aa    MW: 17702.7 Da    PI: 6.3906
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019179009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3444.1e-14411211399
                     TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     +    +p  f+++ g  k  +   tl+ +sg +W+v +  +  ++++++++GW+ F k+n L+ g +v  +++g + f   vk+f+k
  XP_019179009.1  41 KEKKLIPPMFVKHLG--KWLGDISTLRRPSGHQWRVHI--CTDRDGTFFSNGWETFYKDNCLDIGQVVFYTYVGGMHF--DVKIFNK 121
                     444689****95555..356667899************..999999***************************99999..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MENLTKDRGE CQSSSNKKIK QSYTFEVHDF HFTQTIGNND KEKKLIPPMF VKHLGKWLGD  60
ISTLRRPSGH QWRVHICTDR DGTFFSNGWE TFYKDNCLDI GQVVFYTYVG GMHFDVKIFN  120
KDGREKMWDS NFIQNSNEES DHDNPSTPDL E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.13e-11B3 family protein