PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019179039.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 215aa    MW: 24766 Da    PI: 5.4426
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019179039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.18e-1188753128
             NAM  53 aeekewyfFskrdkkyatgkrknra....tksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++ek  yfF+k ++k+++ +r +r+     ++g+W+ + k k++++k +g + g k+ + + ++++p+ +  +W+++e+ l
  XP_019179039.1   8 SHEKYQYFFTKLNRKSKSASRFERTrtvgKRRGTWHGQDKGKSIIHKgTGVALGYKRCFLYRNKEEPE-QDRKWLLKEFYL 87 
                     456778***********999999964444459*************99677789****99998777777.899******976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MGDIPWDSHE KYQYFFTKLN RKSKSASRFE RTRTVGKRRG TWHGQDKGKS IIHKGTGVAL  60
GYKRCFLYRN KEEPEQDRKW LLKEFYLNDA AIMKATEKYP VLEHTKDFVV CRLQRKKSAD  120
DKPQEIKDVP IEKIWQILMG IPLDDSTATE TLPPPPPTEE ILAQPAGVVQ QSMQGENNNG  180
GCDDNNDDDD DMGILNEDPE LVAIQQRLLE ELFIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.11e-06NAC family protein