PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019179094.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 299aa    MW: 35414.4 Da    PI: 7.5734
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019179094.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding262.1e-0893133346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       WT+eE  l ++ +k++G++ Wk+ a+++g  R + ++k+ w+ 
   XP_019179094.1  93 QWTEEEKALVLRHHKLHGND-WKSLAEELG--RHRFHVKDTWRR 133
                      7*******************.********8..999999999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
NVPESENDQN EEVELIRGKR FSKXEDEKIK EAVYKYIAVR NLGEEGLEMV LXSRSHPEVR  60
NCWKEIGAAL PNRPYVAVYY RAQILFRRSE TRQWTEEEKA LVLRHHKLHG NDWKSLAEEL  120
GRHRFHVKDT WRRIKLPNVK RGHWSQDEYQ SLFDLVNTDL QVRIFEDKKS KHGMLRDNIC  180
WTAISDKLST RNGPNCCLKW YNKLTSPMVA EGIWSDSDDY RLIGALYNLD ETCIENVDWD  240
NLVEHRSGEI CLKRWRQMVL HIGNHXNKPF SEQVEVLAKR YCPSLIEVRE TWDSKPLVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-119MYB_related family protein