PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019179283.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 216aa    MW: 24069.8 Da    PI: 4.3238
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019179283.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.17e-162978255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr +k +g+Wv+eIr p++   r r++lg++  +e+Aa+a + a  +l+g
  XP_019179283.1 29 KYTGVRKRK-WGKWVSEIRLPNS---RERIWLGSYNAPEKAARAFDVAQYCLRG 78
                    8*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MKDIIIIIKI CLLCCLQALL IWSPMEQAKY TGVRKRKWGK WVSEIRLPNS RERIWLGSYN  60
APEKAARAFD VAQYCLRGPT ARFNFPDDPP DVPGGRWLSP AEIQGIAASS GNDYRLKPLP  120
ENDGDGVRGT GTDDDDTTHV VEINDTSTSS APGGGAQLEG IDWSFLDNLD APFTSNDYFG  180
LFHGDVYVPP NDYEIEYGDD GESIGHFSQQ SFLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.14e-42ERF family protein