PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019179284.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 261aa    MW: 29482.8 Da    PI: 5.6555
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019179284.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.57.7e-30127186159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +C vkkkv+rs ed+++++ +YegeHnh+
  XP_019179284.1 127 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApSCLVKKKVQRSVEDKSILIAIYEGEHNHP 186
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MGSCALEDNS PCMDIDLNAT VNEIPMRDGQ HETLEEELNE TRAENKKLSA ALSAMCENYS  60
SLQSRLLDFM QERSWKRRKS DRDTTTCGSS EIGYDEASVL SKRPREIRTN ISRVHVQTDP  120
SDTSLIVKDG YQWRKYGQKV TRDNPSPRAY YKCSFAPSCL VKKKVQRSVE DKSILIAIYE  180
GEHNHPHPSE TTQTFTLASQ TSNLGFHNNI QRSSCDSIVD NTKEIQQLLV EKMASSLTND  240
HSFTEALAAA ISERILDNPL D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.15e-68WRKY family protein