PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019179575.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

HSF

Protein Properties

Length: 475aa MW: 53203.6 Da PI: 4.8826

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019179575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.2	6.1e-34	103	194	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+++++e+++l+ +isw +g+sfvv+d+ +fa+ +Lp+ Fkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +gk++ll++ XP_019179575.1 103 FLSKTFDLVEEPSLDPIISWGPKGESFVVWDPVDFARVILPRNFKHNNFSSFVRQLNTYGFRKIDADR---------WEFANEGFLRGKRQLLKH 188 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+ks XP_019179575.1 189 IQRRKS 194 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MNPEEKNPFS SSSSSSSSSS FSTFRRPETP PLPSNTTPFS SEMDPGFPVL SPLSMAFPDP 60 HFLGSGSFPD PISQHQYGAV SSAEGFSMPQ PLECLQETPI PPFLSKTFDL VEEPSLDPII 120 SWGPKGESFV VWDPVDFARV ILPRNFKHNN FSSFVRQLNT YGFRKIDADR WEFANEGFLR 180 GKRQLLKHIQ RRKSPGGGGC SQQHTGGVEG EVEKLRKEKR VMMQEVIELQ QQQRGTVQHM 240 EAVNEKLQAA EQRQKQMVSF LAKVFQNPKV LARLQEQRTI AASARTMKKK FVKHQPHNNP 300 EPSMEEGQIV KYKPQVVEET NMSTSMPMPF SDEHEYLAEE EEGVFGLDPI FKGKNVASSP 360 PPEYLVSFPG DQCESGKENN IPELVPAELE SIMVKEEEIW NMGFQASAGM PSSSHELWGN 420 LGSSYTDIAI SDMWDIDPLH TTTSSGIIEQ WLGDDSPLAQ PQPQPRDDNS KKSDP

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MNPEEKNPFS SSSSSSSSSS FSTFRRPETP PLPSNTTPFS SEMDPGFPVL SPLSMAFPDP  60
HFLGSGSFPD PISQHQYGAV SSAEGFSMPQ PLECLQETPI PPFLSKTFDL VEEPSLDPII  120
SWGPKGESFV VWDPVDFARV ILPRNFKHNN FSSFVRQLNT YGFRKIDADR WEFANEGFLR  180
GKRQLLKHIQ RRKSPGGGGC SQQHTGGVEG EVEKLRKEKR VMMQEVIELQ QQQRGTVQHM  240
EAVNEKLQAA EQRQKQMVSF LAKVFQNPKV LARLQEQRTI AASARTMKKK FVKHQPHNNP  300
EPSMEEGQIV KYKPQVVEET NMSTSMPMPF SDEHEYLAEE EEGVFGLDPI FKGKNVASSP  360
PPEYLVSFPG DQCESGKENN IPELVPAELE SIMVKEEEIW NMGFQASAGM PSSSHELWGN  420
LGSSYTDIAI SDMWDIDPLH TTTSSGIIEQ WLGDDSPLAQ PQPQPRDDNS KKSDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	1e-103	HSF family protein