PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019179747.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 324aa    MW: 35913.3 Da    PI: 5.0161
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019179747.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.7e-1852100355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  XP_019179747.1  52 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 100
                     56******.**********965...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MSSSNTPPSQ QPFSLFEPIR TPTGFSWLQR NTAVAQPSEK RGRRKQAEPG RFLGVRRRPW  60
GRYAAEIRDP TTKERHWLGT FDTAQEAALA YDRAALSMKG AQARTNFIYT TDSCYTTNTN  120
NPFDLHPHPF VLTCTPPEKK PAAAAAANPP PVNNHGGSSD NESSYGSSPQ ENTLFFQFSP  180
HEEHNNSGYL DCIVPDTILK PPNTKTTNSQ ETNENGNYYT TTPQNLPWFW EGQQSWDIMN  240
SCDDEDLTAI LNNNKKKSSM YEVRNACMGM GNNDENPAII NGNALSFDDE VMMMQGGGAT  300
SSSSSTTTCS YAFGDANDYG YSLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.12e-51ERF family protein