PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019179842.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 140aa    MW: 15817.4 Da    PI: 10.7495
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019179842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-183081156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                    + y+GVr++  +g+Wv+e+r+p     + kr+++g++ t+e+Aa+a++ a+++l+ge
  XP_019179842.1 30 PVYRGVRRRG-NGKWVCELREPI----KqKRIWVGSYPTPEMAARAHDVAALALRGE 81
                    68*****999.8*********72....35**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MAAHLDEVVL ARKPKRPAGR KKFIKETRHP VYRGVRRRGN GKWVCELREP IKQKRIWVGS  60
YPTPEMAARA HDVAALALRG EFATLNFADS VWCLSVLVPV SKDAKDIQRA AVMAVEGFRE  120
TTTALAKVVE EEVESKRKTH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136140KRKTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63030.24e-30ERF family protein