PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180164.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 212aa    MW: 23672.4 Da    PI: 4.8868
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-1873123356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr+++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g+
  XP_019180164.1  73 YRGVRRRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEAAALAYDQAAFAMRGA 123
                     9*******.**********44465..*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MDSWVSSFSP ESSSWDFRSF DNSLPFNLND SEEMLLFGVL EQAAAGREQE NSDDTNSSDS  60
VKAEAEAAAE RSYRGVRRRP WGKFAAEIRD STRNGIRVWL GTFDSAEAAA LAYDQAAFAM  120
RGAAAILNFP VERVRESLKD MRCQLEEGCS PVVALKRRHS MRKRRSGRKT GKVVVGDVKV  180
VENVVVFEDL GADYLEQLLS CSSSEIMTPN QW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161166MRKRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-47ERF family protein