PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180190.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 306aa    MW: 34017.6 Da    PI: 5.0204
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180190.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.2e-1753101355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp +   + r++lg+f+ta+eAa a+++a+++++g
  XP_019180190.1  53 FLGVRRRP-WGRYAAEIRDPLT---KERHWLGTFDTAQEAALAYDRAALSMKG 101
                     56******.**********843...4************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MSSSSSSEHP FSLFEPIRTP TGYTWLQRNT SLLSQPSEKR GRRRQAAAEP GRFLGVRRRP  60
WGRYAAEIRD PLTKERHWLG TFDTAQEAAL AYDRAALSMK GTQTRTNFIY SHDFTTTTKT  120
LLFPNSPPPP PPPLQNPNFN DSSPVNKPQN SPLLSLNDTE KNPFFFSNNE ENSGYLDCVV  180
PHSCLNPPSQ ETTKNAIIIP TEKENDDSSQ TAADLRGNPP SCYDGIIGER FWWEDEQPWE  240
LEAMITATNN SDNNRTIVEV GNACMGSSSS PPSSSFDGLM MMGGGASSSS PRFSFLLPDF  300
GYSNLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.18e-42ERF family protein