PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180219.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 184aa    MW: 20846.8 Da    PI: 6.3019
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180219.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.000153153123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H++ H
  XP_019180219.1 31 YECTFCKRGFTNAQALGGHMNIH 53
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MMSSSSDSCG EESEHVPEKF SDENAGVGRS YECTFCKRGF TNAQALGGHM NIHRKDKLKA  60
KQACNNNQQK SAEEISRKPK SNHQVYAAQI SSQQQQEQTF CYSSSRAYVK YHQFFFPSSS  120
SNPSYQFQVL DHRGHYRNFA LQHGDADLSL RVGSPDDDEE ERKEGMEVSE VDLELRLGPN  180
SAFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.13e-15C2H2 family protein