PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180338.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 409aa    MW: 44622.3 Da    PI: 6.7956
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180338.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.5e-19228276355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+g
  XP_019180338.1 228 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAFAYDTAAYMLRG 276
                     8******9.**********955...5**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
MQKEIPACSK EMAASGSPFF AASSGGVFCS PNETAYSSPE RFVSSSDSNS SADEASNNNN  60
FSDFATISDQ VAMNEHDHTR STFPHHGGLS FSDQAAAGIP LNFLESFPSL NAAANAPSSS  120
SNFPNLGLFL QQPSVVETPK KPSSSSSSHS QVSDNFLFPV SQINGEFRQP AESWLRMNQT  180
LTSYSSKGFS DFWLSNTRTQ PMKHTAGRRT TTEKSCFSAA QASPGKLFRG VRQRHWGKWV  240
AEIRLPRNRT RVWLGTFDTA EEAAFAYDTA AYMLRGDYAH LNFPDLKHRL RDNCINGNTA  300
ALLEAKLRSI SQGTAAGATK KANNNNNNKN NEMMIKDPPP PNVKPLVNES SSGVTWTQNP  360
VTPAAEIAAE KKKREVEEAA AENEGGFQLS RMPSLDMDTI WAELLVSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.17e-44ERF family protein