PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180340.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 143aa    MW: 16090.7 Da    PI: 9.2923
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.2e-161970256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g++ AeI+d   +g   r +lg+f++aeeAa+a+++a+ +l+g+
  XP_019180340.1 19 KYHGVRRRP-WGKFGAEIKDSALDG--GRQWLGTFDSAEEAARAYDRAAFNLRGH 70
                    8********.**********43354..899***********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MEGSSSNNKG KAQQKEEVKY HGVRRRPWGK FGAEIKDSAL DGGRQWLGTF DSAEEAARAY  60
DRAAFNLRGH HATLNFPHYY YHPSSASTPP PPPPPPSSSP PARKEGSSST ERSKEVFEIE  120
YFDDSLLEQL LGVENEKKKR KRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.17e-28ERF family protein