PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180342.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 142aa    MW: 15456 Da    PI: 6.7983
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.7e-182577256
             AP2  2 gykGVrwdkkrgrWvAeIrd.pse.ngkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +g+++AeIrd   +  g  +r++lg+f +aeeAa+a+++a+ + +g+
  XP_019180342.1 25 KYRGVRKRP-WGKYAAEIRDmT-KpAG--ARVWLGTFNSAEEAARAYDRAAYATRGH 77
                    8********.**********55.4354..**********************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MADHNTGKTR VDDGGSGGGG SGEVKYRGVR KRPWGKYAAE IRDMTKPAGA RVWLGTFNSA  60
EEAARAYDRA AYATRGHLAI LNFPEEYNLP RTSSHFYSAS SSSSSSAMEA GGKEVIEFEC  120
LDDKVLEDLL DYDQNPGKKN RG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.15e-26ERF family protein