PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019180912.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 207aa MW: 22808.1 Da PI: 9.5375

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019180912.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103	1.7e-32	119	177	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H h+ XP_019180912.1 119 LDDGYRWRKYGQKAVKNNRFPRSYYRCTHQGCNVKKQVQRLSKDEGVVVTTYEGIHSHP 177 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MDAYPSMFRC SSPSPPPPPY LSLMNMMNNN SGGMESGLLG MKMMSDGGVV EVPCSSEMMK 60 SESICAAVAT TANNNNGFTE IGAAKSPPPS AAAAGKKKGE KKMKKARFAF QTRSQVDILD 120 DGYRWRKYGQ KAVKNNRFPR SYYRCTHQGC NVKKQVQRLS KDEGVVVTTY EGIHSHPIEK 180 STDNFENILS QMQIYAAFSL ISSFCIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	4e-57	WRKY family protein