PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019181066.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 224aa    MW: 25157.2 Da    PI: 6.0855
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019181066.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.1e-1980129355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+++AeIrd + ng   r++lg+f+ aeeAa a+++a+ +++g
  XP_019181066.1  80 YRGVRRRP-WGKFAAEIRDSTRNG--IRVWLGTFDNAEEAALAYDQAAFSMRG 129
                     9*******.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MDSCSSFYPL NSALRSPESF PWDCRNFESS LPFNVNDSEE MLLFGVLAQA ARENSETNSS  60
DCSVKEEEVT SETPKKERSY RGVRRRPWGK FAAEIRDSTR NGIRVWLGTF DNAEEAALAY  120
DQAAFSMRGP MAVLNFPVER VRESLREMRC PVEEGGSPVV ALKRRHSMRQ RGLNRRSSGK  180
RREVKVENVV VFEDLGVDYL EQLLSSSGTT SSSSSSSITP IPLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.17e-57ERF family protein