PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019181082.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 375aa    MW: 41561.4 Da    PI: 4.2681
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019181082.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-17117165254
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     + +GVr++k +g+W+AeIrd +     + +r++lg++ +aeeA +a+++ r+++e
  XP_019181082.1 117 KLRGVRQRK-WGKWAAEIRDpF-----KgRRVWLGTYNSAEEASRAYERKRLEFE 165
                     679*****9.**********55.....45**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MAEPQRQPLS NQKSFCKKLK PRAEPMKPMR RVRIVCDDPD ATDSSDDEGV VDVKRPKLFV  60
REIHLPSADP FSCPAKAPET ESSCQDSNNG EKDKNPPTKK KVLAKTLGQP QAASSVKLRG  120
VRQRKWGKWA AEIRDPFKGR RVWLGTYNSA EEASRAYERK RLEFEAMCKN NMKSLDNDSN  180
DNSHSHSLAI SKPQDLDMTV AYSALEEESA ESLASHTSQP SPSSVLEVTS LASASKFVVE  240
ANGCEQNAPE LGVMEDENPA MPQIDDEMEK GPELGVMDDE TLVVAEIGQS MEKVPDLGVM  300
DESLAGNDFR QCLDDFVLGD FEDIPMYGFE GDEQLPATLP DFDFDLDFDF EGCNDTWMDD  360
APMMTGTTSL NIACL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25890.12e-22ERF family protein