PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019181395.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 278aa    MW: 31212.7 Da    PI: 9.9831
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019181395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.91.6e-071463455
                    HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                     ++  E++RR++++  + +L +l+   +   + +K    + L +A++YIk+L+
  XP_019181395.1 14 RNSTTEKNRRQQMKVLYRRLASLVSReN---SLEKCPAFDLLNHATNYIKKLE 63
                    56889*********************66...999****************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MQPNSSLPMR PRGRNSTTEK NRRQQMKVLY RRLASLVSRE NSLEKCPAFD LLNHATNYIK  60
KLEKSVEELK ARKDSLQASV VVLAVNDNER GESLEINIAS GWENKKLKMD KVFGIVQEEG  120
AEVVSATNST VALNIYHTIL CKAFSPRLGM DTNRIQERLK NYISGGSYQF SPHMPSLNDD  180
QTKTPKTHKT FCDMFLFSSP MAFIDPAAYD TASYERTVSV VPVSSSQVTP NLLSLAHHFV  240
SMKRTTRRYM GDILKRADMT DCKPLATPAS VARSVSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.13e-17bHLH family protein