PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019181399.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 170aa    MW: 19199.6 Da    PI: 9.1352
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019181399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH201.2e-061665755
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                     +E++RR++++  + +L +l+ +  +   ++     + L +A++Y+k+L+
  XP_019181399.1 16 LAEKQRRQKLKGLYGQLASLVVSaETCLEKENSPAWDLLDQAIKYVKKLE 65
                    58*********************55444444456679**********995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MKTKPSFRIP KAGRHLAEKQ RRQKLKGLYG QLASLVVSAE TCLEKENSPA WDLLDQAIKY  60
VKKLEKNINE LKARMYSLQV PVEIAVKEID TGDETLMEIN IVCGSENKKL KMHKVIWILE  120
DEGAEVVSAS ISTVDLKIYH TILCKAFLPR LGMDAIMVQQ RLENFISGTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.12e-21bHLH family protein