PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019181415.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 168aa    MW: 18980.8 Da    PI: 9.4473
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019181415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46.2e-091864855
                    HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                     E+ RR++++  +  L +l+P      + +K    e+L +A++YIk+L+
  XP_019181415.1 18 TEKHRRQQMKGLYRHLASLVPAgE--KSLEKSPAFEVLDHATNYIKQLE 64
                    7*********************77..577778889************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MQPNSSSLLP PKPRRHLTEK HRRQQMKGLY RHLASLVPAG EKSLEKSPAF EVLDHATNYI  60
KQLENNVNEL KARKDRLQQA IIVDVNESER GESLEINIVC GSEKKGAMKM DKVFGIVQEE  120
GAEVVSATNS TVGLNIYHTI LCKAFSPRIG MDTIRIQERL KNYISDLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.18e-21bHLH family protein