PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019182230.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 500aa    MW: 54107 Da    PI: 7.8925
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019182230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.86.1e-25192248259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e+s++ ++v+ei+Y++ Hnhe
  XP_019182230.1 192 PDGYNWRKYGQKQVKSPQGSRSYYRCTYSDCCAKK-IECSDHTNRVTEIVYRSPHNHE 248
                     5********************************98.*********************8 PP
2WRKY99.32.4e-31368424258
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                     +Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++er+ +++++v+itY+g H+h
  XP_019182230.1 368 SDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIERAVDNTTAVIITYKGVHDH 424
                     7******************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    
MDDTGEASKP SLQLQNTCAD SGGGVGGGDE PSGATTGTET SEEAEVGGSD SEETLDTVDS  60
PSIQLNKSAS RPDSLASSSS HVLSEVPIEY SLHPTEFLKE IKDEVGISNQ KASTVQAQRR  120
NQLQSADDPS VLELSPTSVT QSISSIPSPT PGERRLSPLE NRNGACIQEV DNQNSSNSKA  180
LSLVPVLKIQ APDGYNWRKY GQKQVKSPQG SRSYYRCTYS DCCAKKIECS DHTNRVTEIV  240
YRSPHNHEPP RKVNTPKVNT PKVNKLAISS MPRSQDSKVA RLNSNADETV PSTSKKHVKE  300
TTPISETKQR DSSGLDDNAE TNVKGEDCDE PTQKKRLKKC SSSPESLPKP GKKAKLVVHA  360
GGDVGISSDG YRWRKYGQKM VKGNPHPRNY YRCTSAGCPV RKHIERAVDN TTAVIITYKG  420
VHDHGMPVPK KRYGQPSAPL VAATASASMT DSQTKKSEPT TQWSVDKEGA LTGETLEHEG  480
EKTVESAKTL LSIGFEIKPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-111WRKY family protein