PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019182449.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 250aa    MW: 28223.8 Da    PI: 9.3204
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019182449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.28.6e-3383135457
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                     +rY+eClkNhAas+Ggh+vDGCgEfmp  g+egt+++lkCaAC+CHRnFHR+  
  XP_019182449.1  83 IRYRECLKNHAASTGGHVVDGCGEFMPG-GKEGTPESLKCAACNCHRNFHRKGI 135
                     79*************************9.999*******************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MESRSKEKFE GIPPSRINLQ AQESSSQQTL DSQREKELEH HHMHEGPSNP DPDPPSLLNN  60
KATTQQVLLP QRFADTSHTT TLIRYRECLK NHAASTGGHV VDGCGEFMPG GKEGTPESLK  120
CAACNCHRNF HRKGITFQTQ NPPMLPPQHY RGAAPPPPPV RAPAESSSED LNAGGGQGLM  180
QVPSSKKRFR TKFTQQQKQQ MHEFAEKIGW RIQKQDDEEV HKFCSEVGVK RQVFKVWMHN  240
SKQAEKKKQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.13e-48ZF-HD family protein