PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019182466.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 237aa    MW: 26244.5 Da    PI: 7.4136
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019182466.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.23.4e-3254109359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     k rY+eCl+NhA+ +GghavDGCgEfm++ ge+g+++alkCaAC+CHRnFHR+e+e+
  XP_019182466.1  54 KPRYRECLRNHAVGIGGHAVDGCGEFMAA-GEDGSVDALKCAACNCHRNFHRKETET 109
                     679*************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEFEDQEEQK GEEGDIEMGA SYDSLGNSKP TQPKMASMSP GGGGGVMAPL QMRKPRYREC  60
LRNHAVGIGG HAVDGCGEFM AAGEDGSVDA LKCAACNCHR NFHRKETETA AAATALVHFG  120
YHPHPTGYLH HHLPPPQHRP LALPSTSGGG AAAYREEMMD DMDLSNPNSG GASKKRFRTK  180
FSQEQKDKMF ELAEKLEWRI QKQDEAAVQQ LCNDYGIRRH VFKVWMHNNK HTLGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-63ZF-HD family protein