PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019182595.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 175aa    MW: 19801.3 Da    PI: 8.5125
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019182595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.27e-122331447
                     HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +++k+lG++ W++Ia +++ gRt++++k++w+++
   XP_019182595.1  2 RLHKLLGNR-WSLIAGRIP-GRTANDVKNYWNTH 33
                     589******.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MRLHKLLGNR WSLIAGRIPG RTANDVKNYW NTHIQKKVFA MASSMQDNWK GKAPEMRENN  60
VVRPRPRRLF LNTTSSLLSG TPPLTGKATA VTFDAQIQGH NKIPQPEATS ELVTKNLQEN  120
NTIITASELE TTTSNDRVQW WEDFLFDNAG STCMNQGQVD WPNFPTDMDL SELLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.15e-19MYB family protein